PETER Kalikow, the exiting MTA chairman, has a transportation problem, but it’s not the typical straphanger’s. A Manhattan Supreme Court lawsuit says his $1 million, 1959 Ferrari suffered $32,000 worth of damage on a trip from Zurich, Switzerland, to New York last May. Kalikow’s spokesman, Marty McLaughlin, told The Post’s Dareh Gregorian the black 410 Superamerica won the top prize at a car show in Italy, but on the trip back, jet fuel was spilled on it, “which kind of ruined it.” Great Northern Insurance, which paid $32,157 to cover the damage, is suing Singapore Airlines Cargo to get the cash back.